Bioinformatics 1 upload page

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=========== Homework 1 =================
Part (a), protein motif search program (plain text source code)
Part (a), your results using this motif against this sequence. (plain text)
Part (b), DNA motif search program (plain text source code)
Part (b), your results using this motif against this sequence. (plain text)

===========Homework 2 =================
Dynamic programming alignment program
Your results using these two sequences, and this matrix. Do gap penalties 1 and 10.

===========Homework 3 =================
PDF files only, please. Due Oct 3. 10000.dat

===========Homework 4 =================
Turn in on paper, please.

===========Homework 5 Due Nov 14 =================
Program. One plain text file.
One PDF or plaintext file.
Upload the results for aligning
MSA 1 Profile 1
MSA 2 Profile 2
BLOSUM matrix.

===========Homework 6 =================
One PDF or plaintext file.

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